bulk_data_transfer() takes a unique dataset or publication
UUID to be used to query the HuBMAP API for information about available
files.
Arguments
- uuid
character(1) corresponding to the HuBMAP Dataset UUID
string. This is expected to be a 32-digit hex number. One unique Dataset
UUID corresponds to one specific URL on Globus. Files corresponding to
unique Dataset UUID are saved on Globus HuBMAP Public Collection webpage.
Value
bulk_data_transfer() display information about how to bulk
download all files related to the dataset or publication.
Details
Additional details are provided on the HuBMAP consortium
webpage, https://software.docs.hubmapconsortium.org/apis
Examples
# Globus available
uuid_globus <- "2d3dbd5e5a3d9d5cfc7a46f06815a4eb"
uuid_sra_dbGaP <- "5ba6a5b81e95c93c26a33980f6e957d7"
uuid_not_available <- "0eb5e457b4855ce28531bc97147196b6"
# bulk_data_transfer(*_globus)